Functional Genomics and Proteomics - Applications, Molecular Diagnostics & Next Generation Sequencing

Poster Programme

Posters are presented during the Poster Party on Thursday, February 2, 2012, 18:15 - 20:30 hrs and during lunch and coffee breaks. The authors are expected to be present during the Poster Party.

The three best posters will be selected and the poster prizes, each endowed with EUR 300, will be awarded on Friday, February 3, 2012 at 12:50 h. All authors are expected to be present.

 

P01 Quantification of fluorescence intensity on microarray surfaces
        J. Sobek, ETH Zurich/CH; W. Weigel, R. Schlapbach, Humboldt-Universität zu Berlin

P02 In-depth-analysis of epitope-antibody-reactivities (EAR) by comparing linear and
        conformational epitopes

        F. Steinbeck, University of Rostock; D. Wu, Shanghai Institute for Biological Sciences/PRC;
        N. Born, P. Lorenz, University of Rostock; B. Ziems, Gesellschaft für Individualisierte Medizin
        mbH, Rostock; J. Wollbold, M. Hecker, STZ for Proteome Analysis, Rostock; Y. Li, Shanghai
        Institute for Biological Sciences/PRC; M.O. Glocker, H.-J. Thiesen, University of Rostock

P03 Biomarker discovery in pneumonia
        A. Iphöfer, M. Nimtz, Helmholtz Centre for Infection Research, Braunschweig; T. Welte,
        Hannover School of Medicine; L. Jänsch, Helmholtz Centre for Infection Research,
        Braunschweig

P04 Simultaneous detection of different microRNA types using the ZIP-code array system
        S.U. Weishaupt, University of Stuttgart; J.D. Hoheisel, German Cancer Research Center,
        Heidelberg; N.C. Hauser, S. Rupp, Fraunhofer IGB, Stuttgart; K. Lemuth, University of
        Stuttgart

P05 A quantitative cell migration assay in live cell chips based on impedance profiling to
        identify metastasis genes by high-throughput screening

        F. Graf, German Cancer Research Center and Mannheim University of Applied Sciences;
        G. Erdmann, M. Boutros, German Cancer Research Center and Heidelberg University;
        C. Maercker, Mannheim University of Applied Sciences and German Cancer Research
        Center, Heidelberg

P06 Development of a DNA-microarray for the detection of resistance determinants in
        Acinetobacter spp.

        S. Dally, Heart and Diabetes Center, Bad Oeynhausen; K. Lemuth, S. Rupp, Fraunhofer IGB,
        Stuttgart; C. Knabbe, J. Weile, Heart and Diabetes Center, Bad Oeynhausen

P07 Easy and fast chip-based detection of biomolecules
        A. Beyer, U. Arnold, K. Weber, J. Popp, Institute of Photonic Technology, Jena

P08 Chip-based electrical detection of CTCs (Circulating Tumor Cells)
        C. Steinbach, K. Weber, J. Popp, Institute of Photonic Technology, Jena

P09 Generating accurate quantitative DNA methylation data by correcting for experimental
         biases

         E. Moskalev, German Cancer Research Center, Heidelberg; S. Majorova, Voronezh State
         Technical University/RUS; M. Zavgorodnij, Voronezh State University/RUS; P. Jandaghi,
         German Cancer Research Center, Heidelberg & Research Center of Medical Sciences,
         Tehran/IR; J.D. Hoheisel, German Cancer Research Center, Heidelberg

P10 Highly specific detection of bacteria and fungi with hybcell compact-sequencing©
        S. Eisenberger, S. Mitterhuemer, B. Ronacher, Anagnostics Bioanalysis GmbH,
        St.  Valentin/A

P11 Fast real-time PCR system with microfluidic disposable chip
        B. Koger, Fraunhofer IPM, Freiburg; B. Faltin, University Freiburg; L. Riegger, BioFluidix
        GmbH, Freiburg; C. Jeney, GenoID, Budapest/H; A. Brandenburg, Fraunhofer IPM, Freiburg

P12 High-throughput cell-based assays identify Placenta-specific 8 (Plac8; Onzin) as a
        central governor of proliferation and survival of pancreatic cancer cells

        T. Honstein, P.B. Kaistha, Y. Chen, M. Sauer, H. Schmidt, S. Melchisedech, R. Kreider,
        T.M. Gress, M. Buchholz, University of Marburg

P13 Modulation of the global regulation of stringent response in Escherichia coli by cra -
        Hierarchical control revealed by a Boolean/Probabilistic Boolean framework

        R. Takors, P.K. Murugan, University of Stuttgart

P14 Microarrays - surface chemical characterization
        P. Dietrich, W. Unger, BAM Federal Institute for Materials Research and Testing, Berlin

P15 Hierarchy of clades revealed from the classification of mitochondrion genomes by
        oligonucleotide frequencies

        M. Sadovsky, Institute of Computational Modelling of SB RAS, Krasnoyarsk/RUS;
        N. Zaitseva, Siberian Federal University, Krasnoyarsk/RUS

P16 Epoxy functionalized surfaces for microarray applications: surface chemical analysis
        and fluorescence labeling of surface species

        C. Funk, Humboldt-Universität zu Berlin; J. Hempel, Scienion AG, Berlin; P.M. Dietrich,
        Th. Gross, H. Min, W.E.S. Unger, BAM Federal Institute for Materials Research and Testing,
        Berlin; W. Weigel, Humboldt-Universität zu Berlin

P17 Multi-analyte immunoassays in serum diagnostics
        K. Köhler, H. Seitz, Fraunhofer Institute for Biomedical Engineering, Potsdam-Golm

P18 A lean and reliable IT-based analytic tool for the intelligent handling of DNA-array data:
        characterisation and classification of chemicals using a self-learning algorithm

        K. Engelhart, D. Dressler, J. Bernhardt, BioTeSys GmbH, Esslingen; J. Steffens, M. Andrian,
        Ars Nova GmbH, Esslingen

P19 The comparative analysis of genomes based on their information capacity
        A. Koval, Siberian Federal University, Krasnoyarsk/RUS; M.G. Sadovsky, Institute of
        Computational Modelling SB RAS, Krasnoyarsk/RUS

P20 Genome evolution simulation and Chargaff's second parity rule
        E. Temlyakova, Siberian Federal University, Krasnoyarsk/RUS; M.G. Sadovsky, Institute of
        Computational Modelling SB RAS, Krasnoyarsk/RUS

P21 Development of living cell microarrays as analytical test systems for bio-sensing
        applications

        R. Bongartz, F. Stahl, T. Scheper, Leibniz Universität Hannover

P22 A new approach in systems biology: analysis and quantification of signalling molecules
        with reverse phase protein microarrays

        R. Wellhausen, H. Seitz, Fraunhofer Institute for Biomedical Engineering, Potsdam-Golm

P23 Towards individualized medicine: next generation sequencing based detection of
        genomic and epigenetic biomarkers for the prognostic stratification of cancer patients

        R. Horres, Goethe University Frankfurt; B. Rotter, GenXPro GmbH, Frankfurt; G. Kahl,
        S. Mueller, Goethe University Frankfurt; P. Winter, GenXpro GmbH, Frankfurt

P24 Microarray-based screening of HSP90 inhibitors
        C. Zeilinger, J.-G. Walter, H. Märzhäuser, B. Schröder, F. Stahl, Leibniz Universität Hannover;
        D. Melzner, D. van Rossum, Sartorius Stedim Biotech, Göttingen; A. Kirschning, T. Scheper,
        Leibniz Universität Hannover

P25 Synthetic-lethal interactions with the key metabolic enzyme fumarase
        M. Boettcher, V. Ladenburger, S. Widder, J.D. Hoheisel, German Cancer Research Center,
        Heidelberg

P26 Proteomic profiling of large cohort of pancreatic cancer patients using antibody array
        M. Alhamdani, S. Mustafa, C. Schröder, A. Bauer, J.D. Hoheisel, German Cancer Research
        Center, Heidelberg

P27 Identification of potential biomarkers for pancreatic cancer by antibody microarrays
        C. Schröder, German Cancer Research Center, Heidelberg; S. Tonack, University of
        Liverpool/UK; T.P. Radon, Queen Mary University of London/UK; M.S.S. Alhamdani,
        S. Kuschmann, A. Bauer, German Cancer Research Center, Heidelberg; E. Costello,
        J.P. Neoptolemos, University of Liverpool/UK; T. Crnogorac-Jurcevic, Queen Mary University
        of London/UK; J.D. Hoheisel, German Cancer Research Center, Heidelberg

P28 Novel biomarkers for the prediction of recurrence in non-muscle-invasive bladder
        cancers identified by complex antibody microarrays

        H. Srinivasan, German Cancer Research Center, Heidelberg; F. Radvanyi, Institut Curie,
        Paris/F; Y. Allory, Henri Mondor Hospital, Paris/F; C. Schröder, J.D. Hoheisel, German
        Cancer Research Center, Heidelberg

P29 On the utility of partially labeled data for classification of microarray data
         L. Lausser, F. Schmid, University of Ulm; M. Buchholz, T. Gress, H.A. Kestler, Marburg
         University Hospital

LMP01 Exome sequencing of a family with dilated cardiomyopathy
              U. Esslinger, C. Meindl, University Hospital Regensburg; E. Villard, INSERM UMR-S956,
              Paris/F; C. Perret, F. Cambien, INSERM UMR-S937, Paris/F; K. Stark, C. Hengstenberg,
              University Hospital Regensburg

LMP02 Data-mining of systematic gene expression profiling from mouse models
              M. Horsch, V. Gailus-Durner, H. Fuchs, M. Hrabĕ de Angelis, J. Beckers, Helmholtz
              Zentrum München, Neuherberg

LMP03 High throughput profiling of the human immune repertoire using a high density
              peptide 
array platform
              K. Stengele, J. Bühler, M. Ott, NimbleGen Systems GmbH, Waldkraiburg

LMP04 An approach towards the epigenetic predisposition of type 2 diabetes using mouse
              models

              P. Huypens, J. Beckers, Helmholtz Zentrum München, GmbH, Neuherberg

LMP05 A RNAi screen in tumorspheres identifies genes important for self renewal of breast
              cancer stem cells

             J. Wolf, J. Fredebohm, S. Widder, J.D. Hoheisel, M. Böttcher, German Cancer Research
             Center, Heidelberg

LMP06 A new microfluidic system for the biomagnetic separation of defined human
              leukemia blood cells

             J. Schemberg, Institute for Bioprocessing and Analytical Measurement Techniques,
             Heilbad-Heiligenstadt; J. Bertram, IBA GmbH, Göttingen; M. Hottenrott, intros GmbH,
             Heilbad-Heiligenstadt; T. Legler, University Medical Center Göttingen; S. Howitz, GeSiM
             mbH, Grosserkmannsdorf; K. Lemke, G. Gastrock, J. Metze, Institute for Bioprocessing
             and Analytical Measurement Techniques, Heilbad-Heiligenstadt

LMP07 A mirror image DNA ligase for bottom up synthetic biology
             J. Weidmann, German Cancer Research Center, Heidelberg; A. Jacob, PEPS4Ls GmbH,
             Heidelberg; J.D. Hoheisel, German Cancer Research Center, Heidelberg

LMP08 Use of cell-free expression and on-chip in-situ recombinant protein synthesis for
              protein microarray technology

              S. Lueong, German Cancer Research Center, Heidelberg; I. Roditi, University of
              Bern/CH; J.D. Hoheisel, German Cancer Research Center, Heidelberg

LMP09 Boolean networks and their evolution for modeling gene regulation
              C. Müssel, Ulm University; M. Hopfensitz, M. Maucher, University Hospital Ulm;
              H.A. Kestler, Ulm University & University Hospital Ulm

LMP10 A delay-differential equations model for irradiation-induced differentiation across
              subpopulations of hematopoietic stem cells

              A. Groß, J. Wang, L. Rudolph, H.A. Kestler, Ulm University

LMP11 Sequencing of a Chlamydia trachomatis genome using the Ion TorrentTM technology
              S. Stepanow, S. Stallmann, J.H. Hegemann, K. Köhrer, Heinrich-Heine University
              Düsseldorf

LMP12 From structure and 3D-design to the rational development of specific inhibitors
              against leukemia

             J. Schanda, M. Grez, C. Wichmann, Georg-Speyer-Haus, Frankfurt am Main

LMP13 An interactive laboratory application for gel-based proteomics
              K. Otte, N. Hoffmann, F. Schulte, K. Niehaus, J. Stoye, Bielefeld University

LMP14 TASC - Finding a typical aberration set for cancer
              M. Grieb, J. Kraus, H.A. Kestler, Ulm University

LMP15 Inferring Boolean networks via higher-order correlations
             M. Maucher, D.V. Kracht, S. Schober, M. Bossert, H.A. Kestler, Ulm University

LMP16 PNA-peptide conjugates for antisense drug development in bacteria
              A. Jacob, M. Dauber, German Cancer Research Center, Heidelberg; N. Patenge,
              B. Kreikemeyer, University of Rostock; M. Mobarak, T. Hain, University Gießen;
              J.D. Hoheisel, German Cancer Research Center, Heidelberg

LMP17 Antibody-specific isoform protein interactions using in-situ protein microarray
              platform

              S. Bilen, Y. Syafrizayanti, J.D. Hoheisel, German Cancer Research Center, Heidelberg

LMP18 Alternative splicing and differential gene expression in pancreatic neuroendocrine
              tumors

             J. Körner, B. Wiedenmann, C. Grötzinger, Charité - Universitätsmedizin, Berlin

LMP19 Peptide microarrays for serum-based detection of viral infections
              H. Andresen, Fraunhofer Institute for Biomedical Engineering, Potsdam; J. Körner,
              Charité - Universitätsmedizin, Berlin; O. Kreuzer, peptides&elephants, Potsdam;
              J. Hollidt, in.vent Diagnostica GmbH, Hennigsdorf; F. Bier, Fraunhofer Institute for
              Biomedical Engineering, Potsdam; C. Grötzinger, Charité - Universitätsmedizin, Berlin

LMP20 Transcript profile comparison of CHO high producer clones by different statistical
              analysis and data visualization approaches

              O. Popp, C. Lucia, S. Werz, Roche Diagnostics GmbH, Penzberg; J. Bernhardt,
              Greifswald University & Decodon GmbH, Greifswald; B. Szperalski, Roche Diagnostics
              GmbH, Penzberg

LMP21 FlexGene™ LDA: gene expression profiling by ligation-dependent amplification and
              Luminex xMAP® technology

              E.N. Kroutter, J.A. Luthy, B. Choudhury, B. Moses, R. Saberi, C. Lahey, E.A. Sekinger,
              Luminex Corporation, Austin, TX/USA

LMP22 Comprehensive analysis of substrate specificity of human lysine-acetyl-transferases
              using peptide microarrays

              A. Masch, C. Rößler, U. Obeck, M. Schutkowski, University Halle-Wittenberg

LMP23 Technical validation of a bead-based antigen assay for the detection of
              Mycobacterium tuberculosis

              S. Rimmele, H. Planatscher, NMI Natural and Medical Sciences Institute at the University
              of Tübingen, Reutlingen; G. Michel, Foundation for Innovation New Diagnostics, 
              Geneva/CH; N. Schneiderhan-Marra, T. Joos, NMI Natural and Medical Sciences Institute
              at the University of Tübingen, Reutlingen

LMP24 Genedata expressionist for omics data management
              T. Zeppenfeld, K. Fink, Genedata AG, Basel/CH

 

 

 

 

 

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